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microPublication / Biology / A C. elegans model for...
A C. elegans model for the rare human channelopathy, Timothy syndrome type 1
Ross Lagoy1, Heesun Kim3,4, Craig C Mello3,4,5 and Dirk R Albrecht1,2
1Worcester Polytechnic Institute, Department of Biomedical Engineering
2Worcester Polytechnic Institute, Department of Biology & Biotechnology
3University of Massachusetts Medical School, Program in Molecular Medicine
4RNA Therapeutics Institute
5Howard Hughes Medical Institute
Correspondence to: Dirk R Albrecht (dalbrecht@wpi.edu)
These authors contributed equally.
Figure 1: A human Timothy syndrome mutation in the C. elegans voltage-gated calcium channel ortholog egl-19 by CRISPR-Cas9 HR causes a developmental arrest phenotype. a. A schematic of the human TS type 1 gain-of-function missense mutation (G406R) in the C. elegans ortholog EGL-19 (G369R). b. CRISPR-Cas9 HR mix was injected into 55 young adult C. elegans. Of 210 F1 roller progeny, 3 were heterozygous for the desired point mutation detected by a PCR/XbaI screen. c. Sequence alignment result from a HR positive heterozygous adult animal with the TS mutation. PAM sequence is underlined and small-guide RNA is beneath the arrow. Raw sequence trace result below shows the heterozygous TS A/G peak at the point mutation site (red arrow). d. C. elegans developmental arrest phenotype harboring the homozygous TS type 1 human mutation. e. Proposed model illustrating possible mechanisms underlying the unexpected C. elegans phenotype caused by the human TS type 1 mutation, which may result from worm-specific dysfunction in egl-19 expression, trafficking, or protein function.

Description

Timothy syndrome (TS) type 1 is a rare genetic human disease caused by a gain-of-function (GOF) missense mutation G406R in the L-type voltage-gated calcium channel (VGCC) a1 subunit gene CACNA1C, which results in severe cardiac arrhythmia and autism (Splawski et al. 2004). The C. elegans ortholog is EGL-19 (Fig. 1a), which is expressed in muscle and neurons (Lee et al. 1997). GOF mutations in egl-19 cause myotonic phenotypes, while reduction-of-function (ROF) mutants are flaccid, variably elongated, and egg-laying defective, and lethal mutations cause paralysis with arrested elongation at the two-fold stage (Pat) (Lee et al. 1997). Additionally, treatment of embryos with nemadipine-A, an antagonist of L-type VGCCs, causes a severe variable abnormal (Vab) phenotype like some ROF hatchlings (Kwok et al. 2006). Neural and muscle cells derived from patients with TS type 1 also yield impaired channel inactivation (Yazawa et al. 2011; Paşca et al. 2011). Therefore, we hypothesized that insertion of the human TS type 1 GOF mutation in the C. elegans genome (G369R) by CRISPR-Cas9 homologous recombination (HR) would cause observable changes in calcium dynamics and serve as a new animal disease model of TS to broadly investigate molecular mechanisms in vivo.

Instead, introduction of the TS type 1 human GOF mutation in C. elegans resulted in homozygous animals that closely resemble the Vab phenotype (Fig. 1b-d), similar to ROF mutant hatchlings and wild type embryos treated with the L-type VGCC antagonist nemadipine-A. This phenotype was observed in three independently edited lines, suggesting it resulted from the human TS mutation rather than a cis loss-of-function mutation in egl-19 generated by the CRISPR-Cas9 editing. Further, heterozygous animals appeared wild type, which is consistent with recessive inheritance of ROF and lethal mutations in egl-19. Taken together, this human mutation appears to dysregulate egl-19 function in C. elegans indirectly, such as through expression, trafficking, or channel kinetics at the cell membrane (Fig. 1e). Evaluation of gene expression, protein localization, and functional imaging or electrophysiology in this new animal model of TS type 1 are needed to distinguish among these possibilities.

This result demonstrates that CRISPR-Cas9 can be used to generate human VGCC disease mutations in C. elegans, although unexpected phenotypes may result from introducing human mutations in these animals. Nonetheless, this new whole organism model of TS type 1 may provide a foundation for investigating molecular mechanisms involved in this severe genetic disease, screening of additional genetic and therapeutic suppressors as potential treatments for translation, and studying other human channelopathies in C. elegans.

Methods

Request a detailed protocol

Plasmid-based CRISPR-Cas9 homologous recombination was performed as previously described (Kim et al. 2014). First, a protospacer adjacent motif (PAM) was identified closest to the desired mutation site (Fig. 1c). Next, custom designed small-guide RNA (sgRNA) oligomers were designed and ordered (IDT) then annealed and ligated into the sgRNA plasmid backbone pRB1017 (Arribere et al. 2014). An 80-nucleotide single stranded oligomer (ssOligo) was custom designed and ordered (IDT) to contain the G-to-R missense mutation, which also co-acted as a silent PAM mutation and XbaI restriction site for efficient PCR screening. The final plasmid injection mix contained 50 ng/µL each of Cas9 vector, pRF4::rol-6(su1006) vector, sgRNA vector, and ssOligo donor. By standard microinjection technique (Mello et al. 1991), a total of 55 wild type animals were injected and 210 F1 animals were cloned then PCR and XbaI screened. This screen yielded three independent heterozygous HR positive lines (~2% efficiency). The G369R allele was maintained by introduction of the DnT1 genetic balancer strain (LGIV), since homozygous TS type 1 animals were unable to produce offspring. This strain (NZ1074) can be requested by contacting D.R.A. at dalbrecht@wpi.edu.

References

Arribere JA, Bell RT, Fu BX, Artiles KL, Hartman PS, Fire AZ. Efficient marker-free recovery of custom genetic modifications with CRISPR/Cas9 in Caenorhabditis elegans. Genetics. 2014 Nov;198(3):837–46.
PubMed
Kim H, Ishidate T, Ghanta KS, Seth M, Conte D Jr, Shirayama M, Mello CC. A co-CRISPR strategy for efficient genome editing in Caenorhabditis elegans. Genetics. 2014 Aug;197(4):1069–80.
PubMed
Kwok TC, Ricker N, Fraser R, Chan AW, Burns A, Stanley EF, McCourt P, Cutler SR, Roy PJ. A small-molecule screen in C. elegans yields a new calcium channel antagonist. Nature. 2006 May;441(7089):91–5.
PubMed
Lee RY, Lobel L, Hengartner M, Horvitz HR, Avery L. Mutations in the alpha1 subunit of an L-type voltage-activated Ca2+ channel cause myotonia in Caenorhabditis elegans. EMBO J. 1997 Oct;16(20):6066–76.
PubMed
Mello CC, Kramer JM, Stinchcomb D, Ambros V. Efficient gene transfer in C. elegans: extrachromosomal maintenance and integration of transforming sequences. EMBO J. 1991 Dec;10(12):3959–70.
PubMed
Paşca SP, Portmann T, Voineagu I, Yazawa M, Shcheglovitov A, Paşca AM, Cord B, Palmer TD, Chikahisa S, Nishino S, Bernstein JA, Hallmayer J, Geschwind DH, Dolmetsch RE. Using iPSC-derived neurons to uncover cellular phenotypes associated with Timothy syndrome. Nature Medicine. 2011 Nov;17(12):1657–62.
PubMed
Splawski I, Timothy KW, Sharpe LM, Decher N, Kumar P, Bloise R, Napolitano C, Schwartz PJ, Joseph RM, Condouris K, Tager-Flusberg H, Priori SG, Sanguinetti MC, Keating MT. Ca(V)1.2 calcium channel dysfunction causes a multisystem disorder including arrhythmia and autism. Cell. 2004 Oct;119(1):19-31.
PubMed
Yazawa M, Hsueh B, Jia X, Paşca AM, Bernstein JA, Hallmayer J, Dolmetsch RE. Using induced pluripotent stem cells to investigate cardiac phenotypes in Timothy syndrome. Nature. 2011 Mar;471(7337):230–4.
PubMed

Funding

This work is supported by the Burroughs Wellcome Fund, Career Award at the Scientific Interface (D.R.A.), NSF CBET1605679 (D.R.A.) and EF1724026 (D.R.A.), and C.C.M. is a Howard Hughes Medical Institute Investigator.

Reviewed By

Raymond Lee

History

Received: December 7, 2018
Accepted: December 17, 2018
Published: December 18, 2018

Copyright

© 2018 by the authors. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International (CC BY 4.0) License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Citation

Lagoy, R; Kim, H; Mello, CC; Albrecht, DR (2018). A C. elegans model for the rare human channelopathy, Timothy syndrome type 1. microPublication Biology. 10.17912/micropub.biology.000081.
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