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microPublication / Biology / me98 is a new allele...
me98 is a new allele of rad-54
Baptiste Roelens1, Karl A Zawadzki1 and Anne M Villeneuve1
1Departments of Developmental Biology and Genetics, Stanford University School of Medicine
Correspondence to: Anne M Villeneuve (annev@stanford.edu)
DAPI stained chromosomes in oocytes of the indicated genotype at diakinesis, the last stage of meiotic prophase; while six pairs of attached homologs are detected in wild-type animals, chromosome structural defects such as fragments (blue arrowhead) or partially decondensed chromosomes (purple arrowhead) are observed in the me98mutant. B. Detection of the crossover site marker GFP::COSA-1 in WT (left) and me98 mutant germ-cells (right). Scale bars on panels A and B represent 2µm. C. Detection of the recombinase RAD-51 in the region of the gonad corresponding to early to middle stages of meiotic prophase in WT (left) and me98 mutant (right) worms. RAD-51 foci are transiently detected in wild-type animals in early prophase as DNA breaks are formed and repair progresses. In contrast, in me98 mutants, RAD-51 foci accumulate and remain at high levels. Scale bar represents 10µm. D. Position and nature of the me98 deletion, located in the second exon of the rad-54 coding sequence, and its consequences on the encoded protein product. E. Screenshot of genome browser centered on the rad-54 locus. Positions of the previously described rad-54 allele, ok615, and the newly identified me98 mutation are represented respectively as a yellow and a red bar.

Description

We isolated the me98 mutant in a genetic screen for C. elegans mutants with an altered number of GFP::COSA-1 foci, which mark the sites of crossovers in wild-type C. elegans germ cells (Rosu et al. 2013). After multiple rounds of outcrossing, we confirmed that the me98 mutant is defective in meiotic prophase as i) chromosomes in diakinesis oocytes appear partially decondensed and structurally compromised (Fig. 1A), ii) me98 fails to form the six GFP::COSA-1 foci observed in wild-type late pachytene meiocytes (Fig. 1B) and iii) me98 accumulates RAD-51 foci during the course of meiotic prophase (Fig. 1C). Further, 100% of eggs laid by me98 mutant hermaphrodites are inviable. These defects are reminiscent of those caused by the previously-described rad-54(ok615) mutation (Mets and Meyer 2009), and sequencing of the rad-54 locus in me98 mutants revealed the presence of a 13bp deletion in the second exon of the annotated transcript (I:9065652 to I:9065664 of WS269). This lesion creates a frameshift that would result in premature termination of translation in the third exon (of seventeen) of the predicted transcript (Fig. 1D), suggesting that it is likely a null allele. Of note, the previously described rad-54 loss-of-function allele, ok615, is an insertion/deletion that also affects the neighboring gene snx-3 (Fig 1E). As gonads of rad-54(me98) mutants appear overall healthier than those in the ok615 mutant, me98 could be a valuable tool to analyze the specific function of rad-54.

Methods

Request a detailed protocol

Cytology: Immunofluorescent detection of GFP::COSA-1 and RAD-51 was performed as described in (Martinez-Perez and Villeneuve 2005) using a mouse anti-GFP antibody (Sigma-Aldrich #11814460001) and a rabbit anti-RAD-51 antibody (Colaiacovo et al. 2003).

Reagents

Strains:

AV727: meIs8[pie-1p::gfp::cosa-1 + unc-119(+)] II;ltIs37[pie-1p::mCherry::his-58 + unc-119(+)] IV;ltIs38[pie-1p::gfp::ph(PLC1delta1) + unc-119(+)]

AV762: rad-54(me98)/hT2[qIs48] (I;III);meIs8[pie-1p::gfp::cosa-1 + unc-119(+)] II;ltIs37[pie-1p::mCherry::his-58 + unc-119(+)] IV;ltIs38[pie-1p::gfp::ph(PLC1delta1) + unc-119(+)]

References

Colaiacovo, M. P., A. J. MacQueen, E. Martinez-Perez, K. McDonald, A. Adamo et al., 2003 Synaptonemal complex assembly in C. elegans is dispensable for loading strand-exchange proteins but critical for proper completion of recombination. Dev Cell 5: 463-474.
PubMed
Martinez-Perez, E., and A. M. Villeneuve, 2005 HTP-1-dependent constraints coordinate homolog pairing and synapsis and promote chiasma formation during C. elegans meiosis. Genes Dev 19: 2727-2743.
PubMed
Mets, D. G., and B. J. Meyer, 2009 Condensins regulate meiotic DNA break distribution, thus crossover frequency, by controlling chromosome structure. Cell 139: 73-86.
PubMed
Rosu, S., K. A. Zawadzki, E. L. Stamper, D. E. Libuda, A. L. Reese et al., 2013 The C. elegans DSB-2 protein reveals a regulatory network that controls competence for meiotic DSB formation and promotes crossover assurance. PLoS Genet 9: e1003674.
PubMed

Funding

This work was supported by NIH grants R01GM067268 and R35GM126964 to AMV

Author Contributions

Baptiste Roelens: Formal analysis, Writing - original draft, Writing - review and editing
Karl A Zawadzki: Formal analysis, Conceptualization
Anne M Villeneuve: Conceptualization, Funding acquisition, Writing - original draft, Writing - review and editing.

Reviewed By

Cori Cahoon

History

Received: April 11, 2019
Accepted: April 26, 2019
Published: April 26, 2019

Copyright

© 2019 by the authors. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International (CC BY 4.0) License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Citation

Roelens, B; Zawadzki, KA; Villeneuve, AM (2019). me98 is a new allele of rad-54. microPublication Biology. 10.17912/micropub.biology.000108.
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