microPublication

Get Your Data Out, Be Cited

  • About
    • Editorial Policies
      • Editorial Staff
      • Editorial Board
      • Criteria For Publication
      • Publishing Information
      • Data Sharing Policy
    • For Authors
      • Preparation And Submission Of A Manuscript
      • Peer Review Process
      • Following Acceptance
      • Appeals
    • For Reviewers
    • Why micropublish?
  • Submit a microPublication
  • Journals
    • microPublication Biology
      • Editorial Board
  • microPublications
    • Biology
      • Species
        • Arabidopsis
        • C. elegans
        • D. discoideum
        • Drosophila
        • Human
        • Mouse
        • S. cerevisiae
        • S. pombe
        • Xenopus
        • Zebrafish
      • Categories
        • Phenotype Data
        • Methods
        • Expression Data
        • Genotype Data
        • Integrations
        • Genetic Screens
        • Models of Human Disease
        • Software
        • Interaction data
        • Database Updates
        • Electrophysiology Data
        • Phylogenetic Data
        • Science and Society
        • Biochemistry
  • Contact
  • More
    • Archives
    • FAQs
    • Newsletter
microPublication / Biology / Caenorhabditis Intervention Testing Program: the...
This article has a correction:
  • Corrigendum - October 25, 2019
  • Corrigendum - July 31, 2019
Caenorhabditis Intervention Testing Program: the tyrosine kinase inhibitor imatinib mesylate does not extend lifespan in nematodes
Anna L Coleman-Hulbert1, Erik Johnson1, Christine A Sedore1, Stephen A Banse1, Max Guo2, Monica Driscoll3, Gordon J Lithgow4 and Patrick C Phillips1
1Institute of Ecology and Evolution, University of Oregon, Eugene, Oregon 97403, USA
2Division of Aging Biology, National Institute on Aging, Bethesda, Maryland 20892, USA
3Department of Molecular Biology and Biochemistry, Rutgers University, Piscataway, New Jersey 08854, USA
4The Buck Institute for Research on Aging, Novato, California 94945, USA
Correspondence to: Patrick C Phillips (pphil@uoregon.edu)
These authors contributed equally.
Longevity under adult imatinib mesylate exposure. Survival curves for C. elegans strain N2, C. briggsae strain AF16, and C. tropicalis strain JU1373 exposed to imatinib mesylate at various concentrations starting on day one of adulthood. Each line represents three technical replicates of 50 animals each. Mean lifespan of N2 on 1000 µM (mean=7.6 days, p<1e-04), AF16 on 50 µM (mean=29 days, p=0.0284), 500 µM (mean=25.6 days, p<1e-04), and 1000 µM (mean=24.9 days, p<1e-04), and JU1373 on 50 µM (mean=23.6 days, p=0.0361) differed significantly from the control (mean=18.5 days for N2, 32.1 days for AF16, 25.2 days for JU1373; Cox proportional hazard mixed-model using the coxme v.2.2-5 package in R (Therneau 2012)).

Description

The Caenorhabditis Intervention Testing Program (CITP) is a National Institutes of Aging (NIA)-funded multi-institutional research consortium that investigates chemical interventions for their potential to extend lifespan and healthspan across a genetically diverse panel of Caenorhabditis nematodes (Lucanic et al., 2017a). To date, the CITP has tested more than 20 compounds, including many of those previously surveyed in mice by the NIA-funded Interventions Testing Program (ITP) (Miller et al., 2007; Nadon et al., 2008). With compounds tested across multiple strains, species, labs, and concentrations, the CITP produces a large body of work before a compound traverses the full testing workflow. The intensive effort required poses an important challenge for the CITP as to how to systematically identify and prioritize compounds to test. Indeed, the selection of chemical interventions that might hold the greatest potential for efficacy is a challenge to the aging field in general.

One approach to chemical intervention prioritization is to use computational approaches that rank candidate compounds based on their likelihood to confer longevity benefits. For example, Ziehm et al. (2017) developed a ranking algorithm that combined information on genetic effects on aging, drug-target orthology relationships and sequence conservation, 3D protein structures, drug binding, and bioavailability. Here, we present the results of a test for lifespan effects of imatinib mesylate (a tyrosine kinase inhibitor; commercially known as Gleevec). Imatinib mesylate was the highest scoring drug-like compound with known mammalian targets ranked for likelihood to modulate aging in the invertebrates C. elegans and D. melanogaster (Ziehm et al., 2017). Imatinib was also highly ranked by a separate computational approach that predicted compound interventions for human aging (Fuentealba et al., 2019).

We assayed lifespan in response to imatinib mesylate exposure in three Caenorhabditis species in triplicate using our previously published workflow (Lucanic et al., 2017a; b). In brief, imatinib mesylate (Toronto Research Chemicals) was dissolved in water and diluted appropriately such that 125 µl of solution could be added to 35 mm diameter NGM plates containing 51 µm FUdR in order to generate the following final imatinib mesylate concentrations: 0.01 µM, 0.1 µM, 1.0 µM, 10 µM, 50 µM, 100 µM, 500 µM, and 1 mM. Worms were age-synchronized by timed egg-lays on standard NGM plates, then transferred at a density of 50 animals per 35 mm plate (control or imatinib mesylate) in triplicate when they reached adulthood. Animals were maintained at 20 °C and moved to fresh experimental plates on the first, second, and fifth day of adulthood, then once weekly afterward, and fed on OP50-1 lawns for the duration of the experiments. Thrice weekly, we observed animals for spontaneous movement or movement after gentle perturbation with a 0.2 mm diameter platinum wire. Death was scored as a lack of movement.

Our results indicate that imatinib mesylate does not extend lifespan in any of the Caenorhabditis species at the concentrations tested here; in fact, at some concentrations, this compound reduced nematode lifespan, although this effect was not consistent among species (Fig. 1). However, as there was only a single biological replicate, this conclusion should be considered as preliminary. Interventions may be ineffective due to a range of causes including permeability barriers, compound stability in vivo, and metabolism by the bacterial food source. While we did not observe any lifespan-extending properties of imatinib mesylate in this study, it is important to note that the ranking methodology used to prioritize imatinib mesylate (Ziehm et al., 2017) predicts whether compounds have aging-modulating effects rather than lifespan-extending properties per se. Notably, Ziehm et al. (2017) identified two aging-associated likely targets of imatinib, ABL1 and MAPK14. In C. elegans, pmk-1 (MAPK14 ortholog) deletion mutants exhibit decreased survival compared to wild-type (Park et al., 2018) indicating that inhibition by imatinib mesylate could likewise result in decreased lifespan. In contrast, abl-1 (ABL1 ortholog) mutants are resistant to endoplasmic reticulum stress induced by tunicamycin (Judy et al., 2013). Imatinib mesylate may target abl-1 as it phenocopies abl-1 mutants with respect to cell death phenotypes (Deng et al., 2004).

In future studies, it will be important to further characterize whether compounds highly ranked in methodologies, such as the one discussed here, possess health or longevity-promoting effects as well as putative aging-modulating effects.

Reagents

The following isolates were procured from the NIH Office of Research Infrastructure Programs-funded (P40 OD010440) Caenorhabditis Genetics Center (CGC): C. elegans N2_PD1073; C. briggsae AF16; C. tropicalis JU1373.

References

Deng X, Hofmann ER, Villanueva A, Hobert O, Capodieci P, Veach DR, Yin X, Campodonico L, Glekas A, Cordon-Cardo C, Clarkson B, Bornmann WG, Fuks Z, OHengartner M, Kolesnick R. Caenorhabditis elegans ABL-1 antagonizes p53-mediated germline apoptosis after ionizing irradiation. Nat. Genet. 2004 36: 906–912.
PubMed
Fuentealba M, Dönertaş HM, Williams R, Labbadia J, Thornton JM, Patridge L. Using the drug-protein interactome to identify anti-ageing compounds for humans. PLoS Comput. Biol. 2019 15: e1006639.
PubMed
Judy ME, Nakamura A, Huang A, Grant H, McCurdy H, Weiberth KF, Gao F, Coppola G, Kenyon C, Kao AW. A shift to organismal stress resistance in programmed cell death mutants. PLoS Genet. 2013 9.
PubMed
Lucanic M, Plummer WT, Chen E, Harke J, Foulger AC, Onken B, Coleman-Hulbert AL, Dumas KJ, Guo S, Johnson E, Bhaumik D, Xue J, Crist AB, Presley MP, Harinath G, Sedore CA, Chamoli M, Kamat S, Chen MK, Angeli S, Chang C, Willis JH, Edgar D, Royal MA, Chao EA, Shobna P, Garrett T, Ibanez-Ventoso C, Hope J, Kish JA, Guo M, Lithgow GJ, Driscoll M, Phillips PC. Impact of genetic background and experimental reproducibility on identifying chemical compounds with robust longevity effects. Nat. Commun. 2017a 8: 14256.
PubMed
Plummer WT, Harke J, Lucanic M, Chen E, Foulger AC, Onken B, Coleman-Hulbert AL, Dumas KJ, Guo S, Johnson E, Bhaumik D, Xue J, Crist AB, Presley MP, Harinath G, Sedore CA, Chamoli M, Kamat S, Chen MK, Angeli S, Chang C, Willis JH, Edgar D, Royal MA, Chao EA, Shobna P, Garrett T, Ibanez-Ventoso C, Hope J, Kish JA, Guo M, Lithgow GJ, , Phillips PC. Standardized protocols from the Caenorhabditis Intervention Testing Program 2013-2016: Conditions and assays used for quantifying the development, fertility and lifespan of hermaphroditic Caenorhabditis strains. Protoc. Exch. 2017b.
10.1038/protex.2016.086
Miller RA, Harrison DE, Astle CM, Floyd RA, Flurkey K, Hensley KL, Javors MA, Leeumenburgh C, Nelson JF, Ongini E, Nadon NL, Warner HR, Strong R. An Aging Interventions Testing Program: Study design and interim report. Aging Cell. 2007 6: 565–575.
PubMed
Nadon NL, Strong R, Miller RA, Nelson J, Javors M, Sharp ZD, Peralba JM, Harrison DE. Design of aging intervention studies: the NIA interventions testing program. Age (Dordrecht). 2008 30: 187–99.
PubMed
Park MR, Ryu S, Maburutse BE, Oh NS, Kim SH, Oh S, Jeong SY, Jeong DY, Oh S, Kim Y. Probiotic Lactobacillus fermentum strain JDFM216 stimulates the longevity and immune response of Caenorhabditis elegans through a nuclear hormone receptor. Sci. Rep. 2018 8: 7441.
10.1038/s41598-018-25333-8 | PubMed
Therneau T. 2012. coxme: Mixed Effects Cox Models R Foundation for Statistical Computing R package version 2, 2–5.
Ziehm M, Kaur S, Ivanov DK, Ballester PJ, Marcus D, Partridge L, Thornton JM. Drug repurposing for aging research using model organisms. Aging Cell. 2017 16: 1006–1015
PubMed

Funding

This work was supported by National Institutes of Health U01 AG045829 and U24 AG056052 to PCP, UO1 AG045844 to GJL, and U01 AG045864 to MD.

Reviewed By

Anonymous

History

Received: June 17, 2019
Accepted: June 27, 2019
Published: July 3, 2019

Copyright

© 2019 by the authors. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International (CC BY 4.0) License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Citation

Coleman-Hulbert, AL; Johnson, E; Sedore, CA; Banse, SA; Guo, M; Driscoll, M; Lithgow, GJ; Phillips, PC (2019). Caenorhabditis Intervention Testing Program: the tyrosine kinase inhibitor imatinib mesylate does not extend lifespan in nematodes. microPublication Biology. 10.17912/micropub.biology.000131. Corrigendum in: microPublication Biology. 10.17912/micropub.biology.000184. Corrigendum for: microPublication Biology. 10.17912/micropub.biology.000144. Corrigendum in: microPublication Biology. 10.17912/micropub.biology.000144.
Download: RIS BibTeX
microPublication Biology is published by
1200 E. California Blvd. MC 1-43 Pasadena, CA 91125
The microPublication project is supported by
The National Institute of Health -- Grant #: 1U01LM012672-01
microPublication Biology:ISSN: 2578-9430