Howard Hughes Medical Institute, California Institute of Technology, Pasadena, California, USA
Description
Recently, the GAL4-UAS system (cGAL) has been adapted for use in C. elegans for control of gene expression across 15°C – 25°C (Wang et al., 2017). In order to create a desired gene expression pattern, one crosses a transgenic strain containing a driver construct with another strain containing an effector gene. Here we mapped several cGAL driver and effector integrations. We first crossed each of the cGAL driver and effector strains with N2 males, picked the heterozygous male progeny, crossed them with hermaphrodites of the mapping strain (DA438), picked L4 hermaphrodites with the corresponding transgenic marker of the driver or effector strain and scored the progeny in the next generation. The DA438 strain contains six recessive mutations, each of which locates on one of the six chromosomes and produces visible phenotypes (Bli on chromosome I, Rol on II, Vab on III, Unc on IV, Dpy on V, and Lon on X (Avery, 1993). F2 progeny with each of the six phenotypes were selected and examined for the presence or absence of the dominant marker associated with the transgene. In the cases where the dominant transgene marker is unlinked to the recessive phenotypic marker, about three quarters of the F2 progeny will have the dominant marker. If the two markers are linked, very few or no animals are expected to have the dominant transgenic marker. The following tables summarize the mapping results for each cGAL strain, stating the ratios of the F2 mutant progeny with and without the dominant transgenic marker.
Effectors
15xUAS::GFP for Cell Labeling
Strain | Genotype | Location | Bli | Rol | Vab | Unc | Dpy | Lon |
PS6843 | syIs300 | LGV | 6:1 | 7:1 | 6:4 | 7:3 | 0:8 | 8:0 |
PS7149 | syIs390 | LGX | 7:3 | 8:2 | 7:3 | 7:1 | 9:1 | 0:6 |
15xUAS::mKate2 for cell Labeling
Strain | Genotype | Location | Bli | Rol | Vab | Unc | Dpy | Lon |
PS7136 | syIs378 | LGI | 1:5 | 9:1 | 7:0 | 5:3 | 6:3 | 8:2 |
15xUAS::hChR2(H134R)::YFP for neuronal activation
Strain | Genotype | Location | Bli | Rol | Vab | Unc | Dpy | Lon |
PS7044 | syIs341 | LGIV | 8:1 | 8:2 | 11:0 | 1:11 | 6:1 | 7:3 |
PS7045 | syIs342 | LGII | 6:0 | 0:9 | 5:1 | 6:0 | 7:3 | 7:0 |
15xUAS::TeTx (Tetanus toxin light chain) for blocking synaptic transmission
Strain | Genotype | Location | Bli | Rol | Vab | Unc | Dpy | Lon |
PS7201 | syIs421 | LGIV | 5:0 | 7:2 | 5:1 | 1:6 | 7:1 | 8:3 |
15xUAS::HisCl1::SL2::GFP for neuronal inhibition
Strain | Genotype | Location | Bli | Rol | Vab | Unc | Dpy | Lon |
PS7199 | syIs371 | LGIII | 9:1 | 6:0 | 0:6 | 4:1 | 6:0 | 4:1 |
PS7107 | syIs373 | LGI | 0:8 | 7:3 | 10:1 | 6:3 | 10:1 | 8:1 |
PS7108 | syIs374 | LGV | 8:1 | 7:1 | 7:1 | 7:1 | 0:10 | 7:1 |
Drivers
Pharyngeal muscle driver, Pmyo-2
Strain | Genotype | Location | Bli | Rol | Vab | Unc | Dpy | Lon |
PS6844 | syIs301 | LGV | 3:2 | 7:1 | 6:4 | 7:3 | 0:7 | 7:0 |
Heat shock driver, Phsp-16.41
Strain | Genotype | Mapped | Location | Bli | Rol | Vab | Unc | Dpy | Lon |
PS7169 | syIs398 syIs337 | syIs398 | LGIII | 8:0 | 7:0 | 1:4 | 7:0 | 7:0 | 6:0 |
PS7172 | syIs401 syIs337 | syIs401 | LGIII | 7:0 | 8:0 | 0:8 | 5:3 | 8:2 | 7:1 |
Pan-neuronal driver, Prab-3
Strain | Genotype | Location | Bli | Rol | Vab | Unc | Dpy | Lon |
PS6961 | syIs334 | LGX | 6:1 | 5:1 | 6:1 | 5:1 | 8:2 | 2:7 |
Intestinal driver, Pnlp-40
Strain | Genotype | Location | Bli | Rol | Vab | Unc | Dpy | Lon |
PS6935 | syIs320 | LGV | 7:0 | 7:0 | 5:1 | 5:1 | 0:7 | 6:1 |
Body muscle driver, Pmyo-3
Strain | Genotype | Location | Bli | Rol | Vab | Unc | Dpy | Lon |
PS6936 | syIs321 | LGI | 1:6 | 4:2 | 4:1 | 6:1 | 6:1 | 5:0 |
Reagents
Effector strains
PS6843 syIs300[15xUAS::Δpes-10::GFP::unc-54 3’UTR + ttx-3p::RFP + pBlueScript] V
PS7149 syIs390[15xUAS::Δpes-10::GFP::let-858 3’UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)] X
PS7136 syIs378[15xUAS::Δpes-10::mKate2::let-858 3’UTR + unc-122p::GFP + 1kb DNA ladder(NEB)]I
PS7044 syIs341[15xUAS::Δpes-10::hChR2(Y134R)::YFP::let-858 3’UTR + ttx-3p::RFP + pBlueScript] IV
PS7045 syIs342[15xUAS::Δpes-10::hChR2(Y134R)::YFP::let-858 3’UTR + ttx-3p::RFP + pBlueScript] II
PS7201 syIs421[15xUAS::Δpes-10::TeTx::let-858 3’UTR + myo-2p::NLS::GFP + pBlueScript] IV
PS7199 syIs371[15xUAS::Δpes-10::HisCl1::SL2::GFP::let-858 3’UTR + unc-122p::GFP + 1kb DNA ladder(NEB)] III
PS7107 syIs373[15xUAS::Δpes-10::HisCl1::SL2::GFP::let-858 3’UTR + unc-122p::GFP + 1kb DNA ladder(NEB)] I
PS7108 syIs374[15xUAS::Δpes-10::HisCl1::SL2::GFP::let-858 3’UTR + unc-122p::GFP + 1kb DNA ladder(NEB)] V
Driver strains
PS6844 syIs301[myo-2p::NLS::GAL4SC::VP64::unc-54 3’UTR + unc-122p::RFP + 1kb DNA ladder (NEB)] V
PS7169 syIs398[hsp16.41p::NLS::GAL4SK::VP64::let-858 3’UTR + unc-122p::RFP + 1kb DNA ladder(NEB)] syIs337[15xUAS::Δpes-10::GFP::let-858 3’UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)] III
PS7172 syIs401[hsp16.41p::NLS::GAL4SK::VP64::let-858 3’UTR + unc-122p::RFP + 1kb DNA ladder(NEB)] syIs337[15xUAS::Δpes-10::GFP::let-858 3’UTR + ttx-3p::RFP + 1kb DNA ladder(NEB)] III
PS6961 syIs334[rab-3p::NLS::GAL4SK::VP64::let-858 3’UTR + unc-122p::RFP + pBlueScript] X
PS6935 syIs320[nlp-40p::NLS::GAL4SK::VP64::unc-54 3’UTR + myo-2p::NLS::mCherry + pBlueScript] V
PS6936 syIs321[myo-3p::NLS::GAL4SK::VP64::unc-54 3’UTR + myo-2p::NLS::mCherry + pBlueScript] I
Mapping strains
DA438 bli-4(e937) I; rol-6(e187) II; daf-2(e1368) vab-7(e1562) III; unc-31(e928) IV; dpy-11(e224) V; lon-2(e678) X
Wild type N2
References
Funding
Howard Hughes Medical Institute (grant number 047-101)
Reviewed By
Michael AilionHistory
Received: June 1, 2017Accepted: June 26, 2017
Published: July 6, 2017
Copyright
© 2017 by the authors. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International (CC BY 4.0) License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.Citation
Walton, SJ; Wang, H; Liu, J; Sternberg, P (2017). Mapping results for a set of cGAL effectors and drivers. microPublication Biology. 10.17912/W2Q947.Download: RIS BibTeX